Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.73□□□□□ -0.21
CEACAM3P40198 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.73□□□□□ -0.21
CEACAM3P40198 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.73□□□□□ -0.21
CEACAM3P40198 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.73□□□□□ -0.21
CEACAM3P40198 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 AL353732.1-201ENST00000569618 1459 ntBASIC13.73□□□□□ -0.21
CEACAM3P40198 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 AC060834.1-201ENST00000443027 2032 ntBASIC13.73□□□□□ -0.21
CEACAM3P40198 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CEACAM3P40198 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CEACAM3P40198 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.72□□□□□ -0.21
CEACAM3P40198 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.72□□□□□ -0.21
CEACAM3P40198 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.72□□□□□ -0.21
CEACAM3P40198 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CEACAM3P40198 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CEACAM3P40198 HCG4-201ENST00000418983 998 ntBASIC13.72□□□□□ -0.21
CEACAM3P40198 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.72□□□□□ -0.21
CEACAM3P40198 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.72□□□□□ -0.21
CEACAM3P40198 SLC25A6P2-201ENST00000497974 877 ntBASIC13.72□□□□□ -0.21
CEACAM3P40198 CXCL1P1-201ENST00000502804 216 ntBASIC13.72□□□□□ -0.21
CEACAM3P40198 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.72□□□□□ -0.21
CEACAM3P40198 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.72□□□□□ -0.21
CEACAM3P40198 RNA5SP416-201ENST00000516838 111 ntBASIC13.72□□□□□ -0.21
CEACAM3P40198 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.72□□□□□ -0.21
CEACAM3P40198 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.72□□□□□ -0.21
CEACAM3P40198 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.72□□□□□ -0.21
CEACAM3P40198 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.72□□□□□ -0.21
CEACAM3P40198 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 AC092068.3-201ENST00000587894 2016 ntBASIC13.72□□□□□ -0.21
CEACAM3P40198 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.72□□□□□ -0.21
CEACAM3P40198 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
CEACAM3P40198 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.72□□□□□ -0.21
CEACAM3P40198 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CEACAM3P40198 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CEACAM3P40198 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CEACAM3P40198 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.71□□□□□ -0.21
CEACAM3P40198 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CEACAM3P40198 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms