Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NFKB1P19838 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.08■□□□□ 0.32
NFKB1P19838 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.08■□□□□ 0.32
NFKB1P19838 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.08■□□□□ 0.32
NFKB1P19838 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NFKB1P19838 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NFKB1P19838 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
NFKB1P19838 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NFKB1P19838 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.08■□□□□ 0.32
NFKB1P19838 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NFKB1P19838 UNC93B6-202ENST00000528242 690 ntBASIC17.08■□□□□ 0.32
NFKB1P19838 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NFKB1P19838 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.08■□□□□ 0.32
NFKB1P19838 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.08■□□□□ 0.32
NFKB1P19838 AC005412.3-201ENST00000580309 715 ntBASIC17.08■□□□□ 0.32
NFKB1P19838 CYP2A7P1-201ENST00000595391 815 ntBASIC17.08■□□□□ 0.32
NFKB1P19838 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.08■□□□□ 0.32
NFKB1P19838 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NFKB1P19838 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.08■□□□□ 0.32
NFKB1P19838 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NFKB1P19838 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.08■□□□□ 0.32
NFKB1P19838 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NFKB1P19838 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
NFKB1P19838 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.07■□□□□ 0.32
NFKB1P19838 AL662844.4-201ENST00000606367 2838 ntBASIC17.07■□□□□ 0.32
NFKB1P19838 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.07■□□□□ 0.32
NFKB1P19838 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.07■□□□□ 0.32
NFKB1P19838 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
NFKB1P19838 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.07■□□□□ 0.32
NFKB1P19838 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.07■□□□□ 0.32
NFKB1P19838 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.07■□□□□ 0.32
NFKB1P19838 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
NFKB1P19838 AC009947.1-201ENST00000444350 727 ntBASIC17.07■□□□□ 0.32
NFKB1P19838 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.07■□□□□ 0.32
NFKB1P19838 IGHV3-22-201ENST00000520721 359 ntBASIC17.07■□□□□ 0.32
NFKB1P19838 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.07■□□□□ 0.32
NFKB1P19838 AC010654.1-201ENST00000615722 808 ntBASIC17.07■□□□□ 0.32
NFKB1P19838 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NFKB1P19838 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.07■□□□□ 0.32
NFKB1P19838 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NFKB1P19838 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.07■□□□□ 0.32
NFKB1P19838 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NFKB1P19838 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.06■□□□□ 0.32
NFKB1P19838 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.06■□□□□ 0.32
NFKB1P19838 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NFKB1P19838 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.06■□□□□ 0.32
NFKB1P19838 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 RNA5SP415-201ENST00000517246 115 ntBASIC17.06■□□□□ 0.32
NFKB1P19838 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.06■□□□□ 0.32
NFKB1P19838 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.06■□□□□ 0.32
NFKB1P19838 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.06■□□□□ 0.32
NFKB1P19838 ACTL9-202ENST00000612068 1252 ntBASIC17.06■□□□□ 0.32
NFKB1P19838 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
NFKB1P19838 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NFKB1P19838 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.06■□□□□ 0.32
NFKB1P19838 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.06■□□□□ 0.32
NFKB1P19838 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
NFKB1P19838 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.05■□□□□ 0.32
NFKB1P19838 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.05■□□□□ 0.32
NFKB1P19838 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 AL512652.2-201ENST00000625156 1716 ntBASIC17.05■□□□□ 0.32
NFKB1P19838 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NFKB1P19838 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NFKB1P19838 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NFKB1P19838 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFKB1P19838 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms