Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RNF216P1-203ENST00000404404 2427 ntBASIC14.68□□□□□ -0.06
SFTPBP07988 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SFTPBP07988 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPBP07988 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPBP07988 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SFTPBP07988 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SFTPBP07988 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPBP07988 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPBP07988 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPBP07988 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPBP07988 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SFTPBP07988 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPBP07988 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPBP07988 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPBP07988 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
SFTPBP07988 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SFTPBP07988 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SFTPBP07988 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SFTPBP07988 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.68□□□□□ -0.06
SFTPBP07988 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SFTPBP07988 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SFTPBP07988 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 AC003669.1-201ENST00000334569 611 ntBASIC14.67□□□□□ -0.06
SFTPBP07988 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.67□□□□□ -0.06
SFTPBP07988 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPBP07988 KLF4P1-201ENST00000412782 1185 ntBASIC14.67□□□□□ -0.06
SFTPBP07988 POM121L3P-201ENST00000419331 1163 ntBASIC14.67□□□□□ -0.06
SFTPBP07988 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.67□□□□□ -0.06
SFTPBP07988 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPBP07988 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPBP07988 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPBP07988 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.67□□□□□ -0.06
SFTPBP07988 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.67□□□□□ -0.06
SFTPBP07988 AC114341.1-201ENST00000618070 349 ntBASIC14.67□□□□□ -0.06
SFTPBP07988 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.67□□□□□ -0.06
SFTPBP07988 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.67□□□□□ -0.06
SFTPBP07988 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SFTPBP07988 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPBP07988 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPBP07988 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPBP07988 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SFTPBP07988 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SFTPBP07988 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.66□□□□□ -0.06
SFTPBP07988 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
SFTPBP07988 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SFTPBP07988 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SFTPBP07988 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SFTPBP07988 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.66□□□□□ -0.06
SFTPBP07988 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.66□□□□□ -0.06
SFTPBP07988 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
SFTPBP07988 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SFTPBP07988 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SFTPBP07988 RCN1P2-201ENST00000398357 915 ntBASIC14.66□□□□□ -0.06
SFTPBP07988 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.66□□□□□ -0.06
SFTPBP07988 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SFTPBP07988 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.66□□□□□ -0.06
SFTPBP07988 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
SFTPBP07988 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.66□□□□□ -0.06
SFTPBP07988 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.66□□□□□ -0.06
SFTPBP07988 FAAHP1-202ENST00000446499 1238 ntBASIC14.66□□□□□ -0.06
SFTPBP07988 AC079781.3-201ENST00000449110 356 ntBASIC14.66□□□□□ -0.06
SFTPBP07988 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.66□□□□□ -0.06
SFTPBP07988 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.66□□□□□ -0.06
SFTPBP07988 AC124947.2-201ENST00000547118 1133 ntBASIC14.66□□□□□ -0.06
SFTPBP07988 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.66□□□□□ -0.06
SFTPBP07988 MIR5100-201ENST00000579544 119 ntBASIC14.66□□□□□ -0.06
SFTPBP07988 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.66□□□□□ -0.06
SFTPBP07988 AL591684.3-201ENST00000605187 298 ntBASIC14.66□□□□□ -0.06
SFTPBP07988 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SFTPBP07988 AL031008.1-201ENST00000619963 541 ntBASIC14.66□□□□□ -0.06
SFTPBP07988 AC073592.5-201ENST00000624854 528 ntBASIC14.66□□□□□ -0.06
SFTPBP07988 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.66□□□□□ -0.06
SFTPBP07988 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SFTPBP07988 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms