Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSBP07858 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.85■□□□□ 0.13
CTSBP07858 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSBP07858 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CTSBP07858 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSBP07858 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSBP07858 AKAP8P1-201ENST00000434743 1349 ntBASIC15.85■□□□□ 0.13
CTSBP07858 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.85■□□□□ 0.13
CTSBP07858 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 KRT8P39-201ENST00000396270 1433 ntBASIC15.85■□□□□ 0.13
CTSBP07858 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.85■□□□□ 0.13
CTSBP07858 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSBP07858 PCDHA12-202ENST00000613593 2588 ntBASIC15.84■□□□□ 0.13
CTSBP07858 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.84■□□□□ 0.13
CTSBP07858 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 LTB4R2-202ENST00000528054 3092 ntBASIC15.84■□□□□ 0.13
CTSBP07858 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CTSBP07858 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.84■□□□□ 0.13
CTSBP07858 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.84■□□□□ 0.13
CTSBP07858 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 RN7SL589P-201ENST00000481268 310 ntBASIC15.84■□□□□ 0.13
CTSBP07858 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.84■□□□□ 0.13
CTSBP07858 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.84■□□□□ 0.13
CTSBP07858 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.84■□□□□ 0.13
CTSBP07858 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.84■□□□□ 0.13
CTSBP07858 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.84■□□□□ 0.13
CTSBP07858 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.84■□□□□ 0.13
CTSBP07858 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
CTSBP07858 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSBP07858 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.84■□□□□ 0.13
CTSBP07858 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CTSBP07858 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CTSBP07858 AC011676.5-201ENST00000624864 2660 ntBASIC15.83■□□□□ 0.13
CTSBP07858 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CTSBP07858 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.83■□□□□ 0.13
CTSBP07858 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CTSBP07858 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CTSBP07858 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSBP07858 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSBP07858 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSBP07858 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSBP07858 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.83■□□□□ 0.12
CTSBP07858 AC106028.4-201ENST00000614509 607 ntBASIC15.83■□□□□ 0.12
CTSBP07858 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.83■□□□□ 0.12
CTSBP07858 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CTSBP07858 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.83■□□□□ 0.12
CTSBP07858 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSBP07858 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CTSBP07858 UXT-AS1-201ENST00000590504 1525 ntBASIC15.83■□□□□ 0.12
CTSBP07858 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CTSBP07858 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSBP07858 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.83■□□□□ 0.12
CTSBP07858 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CTSBP07858 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTSBP07858 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSBP07858 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSBP07858 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CTSBP07858 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSBP07858 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSBP07858 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms