Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
NKX2-2O95096 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.47■□□□□ 0.07
NKX2-2O95096 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.47■□□□□ 0.07
NKX2-2O95096 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NKX2-2O95096 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
NKX2-2O95096 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.47■□□□□ 0.07
NKX2-2O95096 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.47■□□□□ 0.07
NKX2-2O95096 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
NKX2-2O95096 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.47■□□□□ 0.07
NKX2-2O95096 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NKX2-2O95096 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.47■□□□□ 0.07
NKX2-2O95096 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NKX2-2O95096 ME2P1-201ENST00000426028 1970 ntBASIC15.47■□□□□ 0.07
NKX2-2O95096 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.47■□□□□ 0.07
NKX2-2O95096 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NKX2-2O95096 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NKX2-2O95096 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
NKX2-2O95096 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NKX2-2O95096 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.47■□□□□ 0.07
NKX2-2O95096 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NKX2-2O95096 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.46■□□□□ 0.07
NKX2-2O95096 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NKX2-2O95096 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NKX2-2O95096 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.46■□□□□ 0.07
NKX2-2O95096 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.46■□□□□ 0.07
NKX2-2O95096 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.46■□□□□ 0.07
NKX2-2O95096 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.46■□□□□ 0.07
NKX2-2O95096 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.46■□□□□ 0.07
NKX2-2O95096 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.46■□□□□ 0.07
NKX2-2O95096 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.46■□□□□ 0.07
NKX2-2O95096 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.46■□□□□ 0.07
NKX2-2O95096 MIR3909-201ENST00000579518 119 ntBASIC15.46■□□□□ 0.07
NKX2-2O95096 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 AC064836.3-201ENST00000607928 673 ntBASIC15.46■□□□□ 0.07
NKX2-2O95096 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
NKX2-2O95096 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NKX2-2O95096 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
NKX2-2O95096 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NKX2-2O95096 ALOX12P2-203ENST00000570921 1945 ntBASIC15.46■□□□□ 0.07
NKX2-2O95096 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.46■□□□□ 0.07
NKX2-2O95096 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NKX2-2O95096 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX2-2O95096 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX2-2O95096 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.46■□□□□ 0.06
NKX2-2O95096 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.46■□□□□ 0.06
NKX2-2O95096 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NKX2-2O95096 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NKX2-2O95096 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NKX2-2O95096 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NKX2-2O95096 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.45■□□□□ 0.06
NKX2-2O95096 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 GPAA1P2-202ENST00000606848 1787 ntBASIC15.45■□□□□ 0.06
NKX2-2O95096 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX2-2O95096 PCDHB19P-201ENST00000570871 2371 ntBASIC15.45■□□□□ 0.06
NKX2-2O95096 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms