Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.57■□□□□ 0.56
LGR5O75473 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
LGR5O75473 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGR5O75473 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.57■□□□□ 0.56
LGR5O75473 AL139011.1-202ENST00000642063 584 ntBASIC18.57■□□□□ 0.56
LGR5O75473 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LGR5O75473 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LGR5O75473 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LGR5O75473 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LGR5O75473 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.57■□□□□ 0.56
LGR5O75473 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LGR5O75473 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGR5O75473 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.57■□□□□ 0.56
LGR5O75473 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.57■□□□□ 0.56
LGR5O75473 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LGR5O75473 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
LGR5O75473 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 AC244107.1-201ENST00000442033 332 ntBASIC18.56■□□□□ 0.56
LGR5O75473 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.56■□□□□ 0.56
LGR5O75473 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.56■□□□□ 0.56
LGR5O75473 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.56■□□□□ 0.56
LGR5O75473 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
LGR5O75473 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.56■□□□□ 0.56
LGR5O75473 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LGR5O75473 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.56■□□□□ 0.56
LGR5O75473 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LGR5O75473 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.56■□□□□ 0.56
LGR5O75473 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.56■□□□□ 0.56
LGR5O75473 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LGR5O75473 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.55■□□□□ 0.56
LGR5O75473 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.55■□□□□ 0.56
LGR5O75473 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.55■□□□□ 0.56
LGR5O75473 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.55■□□□□ 0.56
LGR5O75473 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.55■□□□□ 0.56
LGR5O75473 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.55■□□□□ 0.56
LGR5O75473 AC107890.1-201ENST00000422478 521 ntBASIC18.55■□□□□ 0.56
LGR5O75473 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.55■□□□□ 0.56
LGR5O75473 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 AC105233.2-201ENST00000523697 349 ntBASIC18.55■□□□□ 0.56
LGR5O75473 AF228730.5-201ENST00000530288 346 ntBASIC18.55■□□□□ 0.56
LGR5O75473 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LGR5O75473 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.55■□□□□ 0.56
LGR5O75473 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.55■□□□□ 0.56
LGR5O75473 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.55■□□□□ 0.56
LGR5O75473 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.55■□□□□ 0.56
LGR5O75473 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.55■□□□□ 0.56
LGR5O75473 AC008677.1-201ENST00000519230 1561 ntBASIC18.55■□□□□ 0.56
LGR5O75473 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LGR5O75473 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LGR5O75473 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 AL645608.8-201ENST00000606034 2086 ntBASIC18.54■□□□□ 0.56
LGR5O75473 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LGR5O75473 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 AC011270.2-201ENST00000624293 2550 ntBASIC18.54■□□□□ 0.56
LGR5O75473 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LGR5O75473 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.54■□□□□ 0.56
LGR5O75473 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LGR5O75473 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.54■□□□□ 0.56
LGR5O75473 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.54■□□□□ 0.56
LGR5O75473 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LGR5O75473 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.54■□□□□ 0.56
LGR5O75473 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LGR5O75473 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.54■□□□□ 0.56
LGR5O75473 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms