Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.24■□□□□ 0.19
SEC22BO75396 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SEC22BO75396 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SEC22BO75396 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.24■□□□□ 0.19
SEC22BO75396 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.24■□□□□ 0.19
SEC22BO75396 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
SEC22BO75396 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC22BO75396 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.23■□□□□ 0.19
SEC22BO75396 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.23■□□□□ 0.19
SEC22BO75396 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.23■□□□□ 0.19
SEC22BO75396 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.23■□□□□ 0.19
SEC22BO75396 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 AC006538.1-201ENST00000567905 1585 ntBASIC16.23■□□□□ 0.19
SEC22BO75396 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SEC22BO75396 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.23■□□□□ 0.19
SEC22BO75396 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.23■□□□□ 0.19
SEC22BO75396 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.23■□□□□ 0.19
SEC22BO75396 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SEC22BO75396 MIR3652-201ENST00000579335 131 ntBASIC16.23■□□□□ 0.19
SEC22BO75396 AL139288.1-201ENST00000623748 933 ntBASIC16.23■□□□□ 0.19
SEC22BO75396 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.23■□□□□ 0.19
SEC22BO75396 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.23■□□□□ 0.19
SEC22BO75396 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.23■□□□□ 0.19
SEC22BO75396 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 CYP2T1P-202ENST00000641596 2535 ntBASIC16.23■□□□□ 0.19
SEC22BO75396 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.23■□□□□ 0.19
SEC22BO75396 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SEC22BO75396 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEC22BO75396 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.22■□□□□ 0.19
SEC22BO75396 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SEC22BO75396 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SEC22BO75396 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.22■□□□□ 0.19
SEC22BO75396 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SEC22BO75396 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.22■□□□□ 0.19
SEC22BO75396 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SEC22BO75396 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SEC22BO75396 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SEC22BO75396 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.22■□□□□ 0.19
SEC22BO75396 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.22■□□□□ 0.19
SEC22BO75396 HLA-J-202ENST00000469281 1241 ntBASIC16.22■□□□□ 0.19
SEC22BO75396 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.22■□□□□ 0.19
SEC22BO75396 AL589182.2-201ENST00000619332 1049 ntBASIC16.22■□□□□ 0.19
SEC22BO75396 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
SEC22BO75396 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.22■□□□□ 0.19
SEC22BO75396 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SEC22BO75396 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.22■□□□□ 0.19
SEC22BO75396 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.22■□□□□ 0.19
SEC22BO75396 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEC22BO75396 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC22BO75396 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SEC22BO75396 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SEC22BO75396 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SEC22BO75396 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.21■□□□□ 0.19
SEC22BO75396 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.21■□□□□ 0.19
SEC22BO75396 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC22BO75396 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC22BO75396 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.21■□□□□ 0.19
SEC22BO75396 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC22BO75396 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms