Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIPK2O43353 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RIPK2O43353 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.1■□□□□ 0.33
RIPK2O43353 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.1■□□□□ 0.33
RIPK2O43353 AC097637.2-201ENST00000624096 1997 ntBASIC17.09■□□□□ 0.33
RIPK2O43353 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIPK2O43353 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.09■□□□□ 0.33
RIPK2O43353 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RIPK2O43353 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RIPK2O43353 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.09■□□□□ 0.33
RIPK2O43353 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
RIPK2O43353 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.09■□□□□ 0.33
RIPK2O43353 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RIPK2O43353 AL020989.1-201ENST00000422979 469 ntBASIC17.09■□□□□ 0.33
RIPK2O43353 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RIPK2O43353 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RIPK2O43353 TP73-AS1-210ENST00000637775 1455 ntBASIC17.09■□□□□ 0.33
RIPK2O43353 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
RIPK2O43353 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.09■□□□□ 0.33
RIPK2O43353 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RIPK2O43353 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.09■□□□□ 0.33
RIPK2O43353 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RIPK2O43353 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.09■□□□□ 0.33
RIPK2O43353 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RIPK2O43353 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.09■□□□□ 0.33
RIPK2O43353 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.09■□□□□ 0.33
RIPK2O43353 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RIPK2O43353 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RIPK2O43353 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
RIPK2O43353 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RIPK2O43353 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RIPK2O43353 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RIPK2O43353 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.08■□□□□ 0.33
RIPK2O43353 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.08■□□□□ 0.32
RIPK2O43353 AC005521.1-201ENST00000393351 872 ntBASIC17.08■□□□□ 0.32
RIPK2O43353 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RIPK2O43353 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.08■□□□□ 0.32
RIPK2O43353 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RIPK2O43353 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RIPK2O43353 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 AC011498.5-201ENST00000592027 486 ntBASIC17.08■□□□□ 0.32
RIPK2O43353 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.08■□□□□ 0.32
RIPK2O43353 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.08■□□□□ 0.32
RIPK2O43353 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RIPK2O43353 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.08■□□□□ 0.32
RIPK2O43353 INTS4P1-201ENST00000438455 1935 ntBASIC17.08■□□□□ 0.32
RIPK2O43353 AP005117.1-202ENST00000581724 1908 ntBASIC17.08■□□□□ 0.32
RIPK2O43353 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.07■□□□□ 0.32
RIPK2O43353 AL512652.2-201ENST00000625156 1716 ntBASIC17.07■□□□□ 0.32
RIPK2O43353 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.07■□□□□ 0.32
RIPK2O43353 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.07■□□□□ 0.32
RIPK2O43353 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RIPK2O43353 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.07■□□□□ 0.32
RIPK2O43353 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.07■□□□□ 0.32
RIPK2O43353 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RIPK2O43353 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 LINC00982-205ENST00000420957 435 ntBASIC17.07■□□□□ 0.32
RIPK2O43353 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.07■□□□□ 0.32
RIPK2O43353 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.07■□□□□ 0.32
RIPK2O43353 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.07■□□□□ 0.32
RIPK2O43353 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.07■□□□□ 0.32
RIPK2O43353 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RIPK2O43353 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RIPK2O43353 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RIPK2O43353 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RIPK2O43353 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 AC243591.1-201ENST00000452967 1364 ntBASIC17.06■□□□□ 0.32
RIPK2O43353 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RIPK2O43353 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.06■□□□□ 0.32
RIPK2O43353 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.06■□□□□ 0.32
RIPK2O43353 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.06■□□□□ 0.32
RIPK2O43353 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 SPDYE21P-201ENST00000413323 827 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms