Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 AL845331.1-201ENST00000424978 1190 ntBASIC14.4□□□□□ -0.1
TMEM235A6NFC5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 RN7SL606P-201ENST00000472779 293 ntBASIC14.4□□□□□ -0.1
TMEM235A6NFC5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 AL353801.3-201ENST00000609898 542 ntBASIC14.4□□□□□ -0.1
TMEM235A6NFC5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM235A6NFC5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 NORAD-201ENST00000565493 5339 ntBASIC14.39□□□□□ -0.11
TMEM235A6NFC5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 HOMER2P1-201ENST00000455653 964 ntBASIC14.39□□□□□ -0.11
TMEM235A6NFC5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 DUX4L17-201ENST00000557360 1267 ntBASIC14.39□□□□□ -0.11
TMEM235A6NFC5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM235A6NFC5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM235A6NFC5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms