Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 DUX4L17-201ENST00000557360 1267 ntBASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AC090616.6-201ENST00000582640 721 ntBASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AC103702.1-201ENST00000548801 2630 ntBASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AC006538.1-201ENST00000567905 1585 ntBASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 AC063926.3-201ENST00000624734 5658 ntBASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 AC009533.2-201ENST00000543664 586 ntBASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 AC012306.2-201ENST00000609350 630 ntBASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV5A0A0B4J249 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms