Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 PCDHB18P-201ENST00000524813 2368 ntBASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 NME2P1-201ENST00000426182 414 ntBASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 FZD10-202ENST00000539839 3282 ntBASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC187A0A096LP49 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CCDC187A0A096LP49 LINC00896-202ENST00000609602 2128 ntBASIC15.83■□□□□ 0.13
CCDC187A0A096LP49 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC187A0A096LP49 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC187A0A096LP49 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 OR8S1-201ENST00000310194 1080 ntBASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 SLC25A1P3-201ENST00000395415 828 ntBASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 AC008764.6-201ENST00000595909 2069 ntBASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 FRMD8P1-201ENST00000440433 1524 ntBASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC187A0A096LP49 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 COX5BP8-201ENST00000416911 349 ntBASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 SPTLC1P1-201ENST00000447199 261 ntBASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 HLA-J-202ENST00000469281 1241 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms