Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 AC091167.2-201ENST00000579581 588 ntBASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 AL121912.1-201ENST00000603683 238 ntBASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 AC008735.5-201ENST00000623544 497 ntBASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CYP46A1Q9Y6A2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 AC131009.4-201ENST00000624048 1740 ntBASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 AC107918.2-201ENST00000530817 355 ntBASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 ME2P1-201ENST00000426028 1970 ntBASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 CYP2T1P-202ENST00000641596 2535 ntBASIC19.93■□□□□ 0.78
CYP46A1Q9Y6A2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 AL671710.1-201ENST00000610245 2349 ntBASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 SLC22A20-204ENST00000530038 1673 ntBASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 PMS2P1-201ENST00000431037 1228 ntBASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 HNRNPDP1-201ENST00000439535 754 ntBASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 AC008667.4-201ENST00000607370 168 ntBASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYP46A1Q9Y6A2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 AC018712.1-201ENST00000455767 687 ntBASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.91■□□□□ 0.78
CYP46A1Q9Y6A2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms