Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 AL596087.1-201ENST00000400979 1969 ntBASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 AL031133.1-201ENST00000406807 723 ntBASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 AC092647.4-201ENST00000457211 535 ntBASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 GPR32P1-201ENST00000601788 811 ntBASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 AC139887.4-201ENST00000607877 719 ntBASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGB1Q9Y5G3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHGB1Q9Y5G3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
PCDHGB1Q9Y5G3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
PCDHGB1Q9Y5G3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.46■□□□□ 0.06
PCDHGB1Q9Y5G3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHGB1Q9Y5G3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHGB1Q9Y5G3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHGB1Q9Y5G3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.46■□□□□ 0.06
PCDHGB1Q9Y5G3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHGB1Q9Y5G3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 TUBB7P-202ENST00000428444 1305 ntBASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 RNF152P1-201ENST00000397754 604 ntBASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 AC111152.3-201ENST00000569699 673 ntBASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 AP000550.4-202ENST00000639755 178 ntBASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms