Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 AC022210.1-201ENST00000449856 793 ntBASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 AC055876.2-201ENST00000531834 546 ntBASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTCBQ9Y3I0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 AL671710.1-201ENST00000610245 2349 ntBASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 RN7SL837P-201ENST00000463010 287 ntBASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCBQ9Y3I0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 SERBP1P3-201ENST00000459980 809 ntBASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTCBQ9Y3I0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 AL354751.1-201ENST00000412768 1863 ntBASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RTCBQ9Y3I0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms