Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 TUBB3P1-201ENST00000405796 1332 ntBASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 SPDYE7P-202ENST00000420373 878 ntBASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 RNA5SP421-201ENST00000516864 134 ntBASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 AL096865.1-201ENST00000606796 927 ntBASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 AC008267.7-201ENST00000624570 1194 ntBASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 AC012313.1-201ENST00000593393 3059 ntBASIC16.81■□□□□ 0.28
NCKAP1Q9Y2A7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 LINC01225-203ENST00000563550 1244 ntBASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 AC027307.2-201ENST00000591252 911 ntBASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1Q9Y2A7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms