Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 AL353705.2-201ENST00000428243 662 ntBASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 HLA-V-204ENST00000476601 1289 ntBASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 FO538757.1-201ENST00000623083 1397 ntBASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPO2Q9UMS6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 AC097493.3-201ENST00000509725 367 ntBASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNPO2Q9UMS6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 TREML5P-201ENST00000421694 576 ntBASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 AC092580.3-201ENST00000430932 139 ntBASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 AC093214.1-201ENST00000511688 1107 ntBASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPO2Q9UMS6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms