Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 AL671277.1-201ENST00000429656 993 ntBASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 AL391256.1-201ENST00000443260 1855 ntBASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 TOP3BP1-201ENST00000420768 1380 ntBASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 AC092474.2-201ENST00000424288 719 ntBASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 AC093214.1-201ENST00000511688 1107 ntBASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 AL161645.1-201ENST00000622716 1255 ntBASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KIAA1549Q9HCM3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 AC106886.4-201ENST00000623557 2502 ntBASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 MIR770-201ENST00000390219 98 ntBASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KIAA1549Q9HCM3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms