Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 AC112504.1-201ENST00000623415 1841 ntBASIC14.5□□□□□ -0.09
CMTM3Q96MX0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 AL138831.2-201ENST00000606564 490 ntBASIC14.5□□□□□ -0.09
CMTM3Q96MX0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 AC010947.1-201ENST00000623454 693 ntBASIC14.5□□□□□ -0.09
CMTM3Q96MX0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMTM3Q96MX0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.49□□□□□ -0.09
CMTM3Q96MX0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 Z99916.2-201ENST00000604037 246 ntBASIC14.49□□□□□ -0.09
CMTM3Q96MX0 AL390719.2-201ENST00000606993 987 ntBASIC14.49□□□□□ -0.09
CMTM3Q96MX0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 CYP2D8P-201ENST00000433633 1490 ntBASIC14.49□□□□□ -0.09
CMTM3Q96MX0 CDC14C-201ENST00000428251 1719 ntBASIC14.49□□□□□ -0.09
CMTM3Q96MX0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMTM3Q96MX0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms