Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ITCHQ96J02 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.08■□□□□ 0.16
ITCHQ96J02 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.08■□□□□ 0.16
ITCHQ96J02 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ITCHQ96J02 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ITCHQ96J02 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
ITCHQ96J02 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ITCHQ96J02 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ITCHQ96J02 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ITCHQ96J02 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.07■□□□□ 0.16
ITCHQ96J02 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.07■□□□□ 0.16
ITCHQ96J02 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.07■□□□□ 0.16
ITCHQ96J02 AC074051.2-201ENST00000565115 352 ntBASIC16.07■□□□□ 0.16
ITCHQ96J02 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.07■□□□□ 0.16
ITCHQ96J02 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.07■□□□□ 0.16
ITCHQ96J02 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.07■□□□□ 0.16
ITCHQ96J02 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ITCHQ96J02 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.07■□□□□ 0.16
ITCHQ96J02 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.07■□□□□ 0.16
ITCHQ96J02 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ITCHQ96J02 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
ITCHQ96J02 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ITCHQ96J02 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ITCHQ96J02 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ITCHQ96J02 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.06■□□□□ 0.16
ITCHQ96J02 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.06■□□□□ 0.16
ITCHQ96J02 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.06■□□□□ 0.16
ITCHQ96J02 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.06■□□□□ 0.16
ITCHQ96J02 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ITCHQ96J02 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.06■□□□□ 0.16
ITCHQ96J02 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ITCHQ96J02 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.06■□□□□ 0.16
ITCHQ96J02 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ITCHQ96J02 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.06■□□□□ 0.16
ITCHQ96J02 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ITCHQ96J02 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.06■□□□□ 0.16
ITCHQ96J02 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.06■□□□□ 0.16
ITCHQ96J02 ABCD1P5-201ENST00000445663 754 ntBASIC16.06■□□□□ 0.16
ITCHQ96J02 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.06■□□□□ 0.16
ITCHQ96J02 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.06■□□□□ 0.16
ITCHQ96J02 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.06■□□□□ 0.16
ITCHQ96J02 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.06■□□□□ 0.16
ITCHQ96J02 AC073592.4-201ENST00000623827 446 ntBASIC16.06■□□□□ 0.16
ITCHQ96J02 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.06■□□□□ 0.16
ITCHQ96J02 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.06■□□□□ 0.16
ITCHQ96J02 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ITCHQ96J02 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
ITCHQ96J02 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ITCHQ96J02 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ITCHQ96J02 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms