Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CNOT9Q92600 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.53■□□□□ 0.08
CNOT9Q92600 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CNOT9Q92600 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.53■□□□□ 0.08
CNOT9Q92600 KRT18P27-201ENST00000427733 1299 ntBASIC15.53■□□□□ 0.08
CNOT9Q92600 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.53■□□□□ 0.08
CNOT9Q92600 HNRNPDP1-201ENST00000439535 754 ntBASIC15.53■□□□□ 0.08
CNOT9Q92600 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.53■□□□□ 0.08
CNOT9Q92600 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.53■□□□□ 0.08
CNOT9Q92600 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.53■□□□□ 0.08
CNOT9Q92600 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CNOT9Q92600 AL691432.3-201ENST00000621860 400 ntBASIC15.53■□□□□ 0.08
CNOT9Q92600 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT9Q92600 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.53■□□□□ 0.08
CNOT9Q92600 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT9Q92600 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CNOT9Q92600 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT9Q92600 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CNOT9Q92600 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CNOT9Q92600 AL596257.1-201ENST00000641463 2694 ntBASIC15.52■□□□□ 0.08
CNOT9Q92600 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 AC002310.6-201ENST00000624451 1377 ntBASIC15.52■□□□□ 0.08
CNOT9Q92600 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CNOT9Q92600 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT9Q92600 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT9Q92600 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.52■□□□□ 0.08
CNOT9Q92600 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CNOT9Q92600 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT9Q92600 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
CNOT9Q92600 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 AC073621.1-201ENST00000392730 636 ntBASIC15.52■□□□□ 0.08
CNOT9Q92600 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
CNOT9Q92600 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT9Q92600 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT9Q92600 AC079781.3-201ENST00000449110 356 ntBASIC15.52■□□□□ 0.08
CNOT9Q92600 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.52■□□□□ 0.08
CNOT9Q92600 RPS15P9-201ENST00000494093 319 ntBASIC15.52■□□□□ 0.08
CNOT9Q92600 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT9Q92600 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.52■□□□□ 0.08
CNOT9Q92600 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
CNOT9Q92600 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.52■□□□□ 0.08
CNOT9Q92600 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT9Q92600 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.52■□□□□ 0.08
CNOT9Q92600 AF228730.7-201ENST00000641842 219 ntBASIC15.52■□□□□ 0.08
CNOT9Q92600 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT9Q92600 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT9Q92600 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.52■□□□□ 0.07
CNOT9Q92600 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.07
CNOT9Q92600 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.52■□□□□ 0.07
CNOT9Q92600 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT9Q92600 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT9Q92600 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CNOT9Q92600 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.52■□□□□ 0.07
CNOT9Q92600 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.52■□□□□ 0.07
CNOT9Q92600 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CNOT9Q92600 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT9Q92600 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.52■□□□□ 0.07
CNOT9Q92600 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CNOT9Q92600 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT9Q92600 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT9Q92600 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CNOT9Q92600 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT9Q92600 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT9Q92600 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT9Q92600 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CNOT9Q92600 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT9Q92600 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.51■□□□□ 0.07
CNOT9Q92600 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CNOT9Q92600 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT9Q92600 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT9Q92600 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT9Q92600 TOP3BP1-201ENST00000420768 1380 ntBASIC15.51■□□□□ 0.07
CNOT9Q92600 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CNOT9Q92600 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT9Q92600 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT9Q92600 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.51■□□□□ 0.07
CNOT9Q92600 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNOT9Q92600 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT9Q92600 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CNOT9Q92600 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNOT9Q92600 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms