Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 TTTY23B-201ENST00000442790 549 ntBASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 RN7SL837P-201ENST00000463010 287 ntBASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SH3TC2Q8TF17 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 MIR4538-201ENST00000581377 78 ntBASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SH3TC2Q8TF17 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 AL353705.2-201ENST00000428243 662 ntBASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.91■□□□□ 0.62
SH3TC2Q8TF17 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms