Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 LINC00895-201ENST00000629028 1637 ntBASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 ALOX12P2-203ENST00000570921 1945 ntBASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IL1Q8TBN0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB3IL1Q8TBN0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAB3IL1Q8TBN0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB3IL1Q8TBN0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 AC003669.1-201ENST00000334569 611 ntBASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 AC092597.1-201ENST00000487352 616 ntBASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 AL138831.2-201ENST00000606564 490 ntBASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IL1Q8TBN0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 KRT18P57-201ENST00000443599 1254 ntBASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 AL353801.3-201ENST00000609898 542 ntBASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 LINC00554-201ENST00000564841 3011 ntBASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB3IL1Q8TBN0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms