Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 AC092068.3-201ENST00000587894 2016 ntBASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 KLF4P1-201ENST00000412782 1185 ntBASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 UNC93B7-201ENST00000509439 705 ntBASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 STK19B-204ENST00000512515 211 ntBASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 AD001527.2-201ENST00000622994 785 ntBASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 AL353593.2-201ENST00000602529 1483 ntBASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP61Q8NHU2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 AC132938.5-201ENST00000624980 1813 ntBASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 AP001269.4-201ENST00000609611 512 ntBASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 AC016396.2-201ENST00000562575 1417 ntBASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFAP61Q8NHU2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms