Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 LAGE3P1-201ENST00000425356 484 ntBASIC14.9□□□□□ -0.02
RTTNQ86VV8 AC136632.2-201ENST00000512891 861 ntBASIC14.9□□□□□ -0.02
RTTNQ86VV8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 AC107918.4-202ENST00000641623 219 ntBASIC14.9□□□□□ -0.02
RTTNQ86VV8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 AC092364.2-201ENST00000596710 2692 ntBASIC14.9□□□□□ -0.02
RTTNQ86VV8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.9□□□□□ -0.02
RTTNQ86VV8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTTNQ86VV8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 MED15P5-201ENST00000423150 992 ntBASIC14.89□□□□□ -0.03
RTTNQ86VV8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 AC112482.1-201ENST00000492080 688 ntBASIC14.89□□□□□ -0.03
RTTNQ86VV8 RFPL4AP1-201ENST00000530883 850 ntBASIC14.89□□□□□ -0.03
RTTNQ86VV8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 AC073621.1-201ENST00000392730 636 ntBASIC14.89□□□□□ -0.03
RTTNQ86VV8 KRT18P3-201ENST00000451602 1288 ntBASIC14.89□□□□□ -0.03
RTTNQ86VV8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RTTNQ86VV8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTTNQ86VV8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
RTTNQ86VV8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RTTNQ86VV8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms