Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.95□□□□□ -0.18
CSMD2Q7Z408 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.95□□□□□ -0.18
CSMD2Q7Z408 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.95□□□□□ -0.18
CSMD2Q7Z408 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 KRT8P13-201ENST00000463294 1010 ntBASIC13.95□□□□□ -0.18
CSMD2Q7Z408 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD2Q7Z408 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC114501.2-201ENST00000439631 535 ntBASIC13.94□□□□□ -0.18
CSMD2Q7Z408 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC009542.2-202ENST00000619004 1067 ntBASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC092978.1-202ENST00000637590 1327 ntBASIC13.94□□□□□ -0.18
CSMD2Q7Z408 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 CALR4P-201ENST00000431943 946 ntBASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC007969.1-201ENST00000433675 447 ntBASIC13.94□□□□□ -0.18
CSMD2Q7Z408 RN7SL618P-201ENST00000477850 296 ntBASIC13.94□□□□□ -0.18
CSMD2Q7Z408 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC253536.4-201ENST00000440539 267 ntBASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC092337.1-201ENST00000568699 1129 ntBASIC13.94□□□□□ -0.18
CSMD2Q7Z408 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD2Q7Z408 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD2Q7Z408 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms