Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
ATP1B3P54709 SPDYE21P-201ENST00000413323 827 ntBASIC14.66□□□□□ -0.06
ATP1B3P54709 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.66□□□□□ -0.06
ATP1B3P54709 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.66□□□□□ -0.06
ATP1B3P54709 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 MIR3180-1-201ENST00000580374 94 ntBASIC14.66□□□□□ -0.06
ATP1B3P54709 MIR3180-3-201ENST00000584616 94 ntBASIC14.66□□□□□ -0.06
ATP1B3P54709 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.66□□□□□ -0.06
ATP1B3P54709 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.66□□□□□ -0.06
ATP1B3P54709 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
ATP1B3P54709 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ATP1B3P54709 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATP1B3P54709 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ATP1B3P54709 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 ABCD1P5-201ENST00000445663 754 ntBASIC14.65□□□□□ -0.06
ATP1B3P54709 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 MIR5100-201ENST00000579544 119 ntBASIC14.65□□□□□ -0.06
ATP1B3P54709 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 AC091076.1-201ENST00000610741 619 ntBASIC14.65□□□□□ -0.06
ATP1B3P54709 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 AC078925.2-201ENST00000624013 1973 ntBASIC14.65□□□□□ -0.06
ATP1B3P54709 AC097637.2-201ENST00000624096 1997 ntBASIC14.65□□□□□ -0.06
ATP1B3P54709 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 AC092850.2-201ENST00000623821 2697 ntBASIC14.65□□□□□ -0.06
ATP1B3P54709 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ATP1B3P54709 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.65□□□□□ -0.06
ATP1B3P54709 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATP1B3P54709 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
ATP1B3P54709 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.64□□□□□ -0.07
ATP1B3P54709 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
ATP1B3P54709 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.64□□□□□ -0.07
ATP1B3P54709 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.64□□□□□ -0.07
ATP1B3P54709 AC148477.5-201ENST00000625164 1645 ntBASIC14.64□□□□□ -0.07
ATP1B3P54709 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATP1B3P54709 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
ATP1B3P54709 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.64□□□□□ -0.07
ATP1B3P54709 NUS1P2-201ENST00000417358 873 ntBASIC14.64□□□□□ -0.07
ATP1B3P54709 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms