Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LIMK2P53671 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.97■□□□□ 0.31
LIMK2P53671 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 LINC00895-201ENST00000629028 1637 ntBASIC16.97■□□□□ 0.31
LIMK2P53671 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.97■□□□□ 0.31
LIMK2P53671 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LIMK2P53671 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
LIMK2P53671 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.97■□□□□ 0.31
LIMK2P53671 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 BX842568.4-201ENST00000421222 227 ntBASIC16.97■□□□□ 0.31
LIMK2P53671 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
LIMK2P53671 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.97■□□□□ 0.31
LIMK2P53671 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.97■□□□□ 0.31
LIMK2P53671 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.97■□□□□ 0.31
LIMK2P53671 AC140113.2-201ENST00000604370 208 ntBASIC16.97■□□□□ 0.31
LIMK2P53671 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.97■□□□□ 0.31
LIMK2P53671 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 AL021920.2-201ENST00000624828 1351 ntBASIC16.97■□□□□ 0.31
LIMK2P53671 AC026691.1-201ENST00000602502 2017 ntBASIC16.97■□□□□ 0.31
LIMK2P53671 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LIMK2P53671 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIMK2P53671 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LIMK2P53671 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.96■□□□□ 0.31
LIMK2P53671 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LIMK2P53671 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.96■□□□□ 0.31
LIMK2P53671 MED15P5-201ENST00000423150 992 ntBASIC16.96■□□□□ 0.31
LIMK2P53671 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.96■□□□□ 0.31
LIMK2P53671 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.96■□□□□ 0.31
LIMK2P53671 PGAM5P1-201ENST00000518923 814 ntBASIC16.96■□□□□ 0.31
LIMK2P53671 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.96■□□□□ 0.31
LIMK2P53671 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.96■□□□□ 0.31
LIMK2P53671 UNC93B6-202ENST00000528242 690 ntBASIC16.96■□□□□ 0.31
LIMK2P53671 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.96■□□□□ 0.31
LIMK2P53671 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LIMK2P53671 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.96■□□□□ 0.31
LIMK2P53671 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.96■□□□□ 0.31
LIMK2P53671 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.96■□□□□ 0.31
LIMK2P53671 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.96■□□□□ 0.31
LIMK2P53671 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.96■□□□□ 0.31
LIMK2P53671 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
LIMK2P53671 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LIMK2P53671 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LIMK2P53671 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIMK2P53671 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LIMK2P53671 AL662844.4-201ENST00000606367 2838 ntBASIC16.96■□□□□ 0.3
LIMK2P53671 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LIMK2P53671 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LIMK2P53671 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LIMK2P53671 AC079328.2-201ENST00000561241 3354 ntBASIC16.95■□□□□ 0.3
LIMK2P53671 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIMK2P53671 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LIMK2P53671 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.95■□□□□ 0.3
LIMK2P53671 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIMK2P53671 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIMK2P53671 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.95■□□□□ 0.3
LIMK2P53671 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIMK2P53671 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.95■□□□□ 0.3
LIMK2P53671 HLA-J-202ENST00000469281 1241 ntBASIC16.95■□□□□ 0.3
LIMK2P53671 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.95■□□□□ 0.3
LIMK2P53671 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.95■□□□□ 0.3
LIMK2P53671 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIMK2P53671 AC006557.2-201ENST00000592985 1240 ntBASIC16.95■□□□□ 0.3
LIMK2P53671 AL356488.2-201ENST00000602755 427 ntBASIC16.95■□□□□ 0.3
LIMK2P53671 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LIMK2P53671 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIMK2P53671 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LIMK2P53671 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms