Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC34P49427 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC34P49427 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDC34P49427 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC34P49427 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDC34P49427 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CDC34P49427 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.34□□□□□ -0.27
CDC34P49427 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDC34P49427 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.34□□□□□ -0.27
CDC34P49427 MIR1238-201ENST00000408483 83 ntBASIC13.34□□□□□ -0.27
CDC34P49427 UBE2SP1-201ENST00000450587 669 ntBASIC13.34□□□□□ -0.27
CDC34P49427 AC068472.1-201ENST00000474589 881 ntBASIC13.34□□□□□ -0.27
CDC34P49427 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.34□□□□□ -0.27
CDC34P49427 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CDC34P49427 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.34□□□□□ -0.27
CDC34P49427 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.34□□□□□ -0.27
CDC34P49427 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CDC34P49427 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CDC34P49427 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
CDC34P49427 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC34P49427 AL391807.1-203ENST00000604392 2365 ntBASIC13.34□□□□□ -0.27
CDC34P49427 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CDC34P49427 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CDC34P49427 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CDC34P49427 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CDC34P49427 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CDC34P49427 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CDC34P49427 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.33□□□□□ -0.27
CDC34P49427 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CDC34P49427 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC34P49427 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC34P49427 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC34P49427 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.33□□□□□ -0.28
CDC34P49427 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
CDC34P49427 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CDC34P49427 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CDC34P49427 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.33□□□□□ -0.28
CDC34P49427 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.33□□□□□ -0.28
CDC34P49427 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms