Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.68■□□□□ 0.58
CTGFP29279 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.68■□□□□ 0.58
CTGFP29279 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTGFP29279 KRT8P44-201ENST00000441609 1350 ntBASIC18.68■□□□□ 0.58
CTGFP29279 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.67■□□□□ 0.58
CTGFP29279 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.67■□□□□ 0.58
CTGFP29279 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.67■□□□□ 0.58
CTGFP29279 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.67■□□□□ 0.58
CTGFP29279 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.67■□□□□ 0.58
CTGFP29279 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.67■□□□□ 0.58
CTGFP29279 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.67■□□□□ 0.58
CTGFP29279 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CTGFP29279 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTGFP29279 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.67■□□□□ 0.58
CTGFP29279 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTGFP29279 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTGFP29279 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.66■□□□□ 0.58
CTGFP29279 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.66■□□□□ 0.58
CTGFP29279 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CTGFP29279 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CTGFP29279 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.66■□□□□ 0.58
CTGFP29279 AC092337.1-201ENST00000568699 1129 ntBASIC18.66■□□□□ 0.58
CTGFP29279 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 AC010319.3-201ENST00000597028 470 ntBASIC18.66■□□□□ 0.58
CTGFP29279 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.66■□□□□ 0.58
CTGFP29279 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.66■□□□□ 0.58
CTGFP29279 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 AC006277.1-201ENST00000624348 1610 ntBASIC18.66■□□□□ 0.58
CTGFP29279 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.66■□□□□ 0.58
CTGFP29279 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTGFP29279 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
CTGFP29279 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.66■□□□□ 0.58
CTGFP29279 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CTGFP29279 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CTGFP29279 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.65■□□□□ 0.58
CTGFP29279 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTGFP29279 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTGFP29279 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CTGFP29279 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTGFP29279 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.65■□□□□ 0.58
CTGFP29279 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTGFP29279 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTGFP29279 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTGFP29279 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.65■□□□□ 0.58
CTGFP29279 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CTGFP29279 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CTGFP29279 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.65■□□□□ 0.58
CTGFP29279 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.65■□□□□ 0.58
CTGFP29279 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.65■□□□□ 0.58
CTGFP29279 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.65■□□□□ 0.58
CTGFP29279 BTNL10-201ENST00000595971 695 ntBASIC18.65■□□□□ 0.58
CTGFP29279 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.65■□□□□ 0.58
CTGFP29279 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTGFP29279 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.65■□□□□ 0.58
CTGFP29279 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.65■□□□□ 0.58
CTGFP29279 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.65■□□□□ 0.58
CTGFP29279 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CTGFP29279 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTGFP29279 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTGFP29279 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.65■□□□□ 0.58
CTGFP29279 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.64■□□□□ 0.58
CTGFP29279 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTGFP29279 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms