Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ATF1P18846 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ATF1P18846 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 DBET-201ENST00000630918 3363 ntBASIC14.81□□□□□ -0.04
ATF1P18846 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ATF1P18846 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 FAM86EP-206ENST00000510506 987 ntBASIC14.81□□□□□ -0.04
ATF1P18846 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.81□□□□□ -0.04
ATF1P18846 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.81□□□□□ -0.04
ATF1P18846 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.81□□□□□ -0.04
ATF1P18846 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.81□□□□□ -0.04
ATF1P18846 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.81□□□□□ -0.04
ATF1P18846 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ATF1P18846 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.81□□□□□ -0.04
ATF1P18846 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.81□□□□□ -0.04
ATF1P18846 KRT18P1-202ENST00000452408 1331 ntBASIC14.81□□□□□ -0.04
ATF1P18846 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 AC233702.3-201ENST00000578656 1387 ntBASIC14.81□□□□□ -0.04
ATF1P18846 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.81□□□□□ -0.04
ATF1P18846 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATF1P18846 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ATF1P18846 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.81□□□□□ -0.04
ATF1P18846 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.8□□□□□ -0.04
ATF1P18846 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
ATF1P18846 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.8□□□□□ -0.04
ATF1P18846 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ATF1P18846 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.8□□□□□ -0.04
ATF1P18846 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 TSSC2-201ENST00000450217 709 ntBASIC14.8□□□□□ -0.04
ATF1P18846 MINOS1P3-201ENST00000457048 203 ntBASIC14.8□□□□□ -0.04
ATF1P18846 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.8□□□□□ -0.04
ATF1P18846 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
ATF1P18846 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
ATF1P18846 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ATF1P18846 Z69720.1-201ENST00000601483 472 ntBASIC14.8□□□□□ -0.04
ATF1P18846 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.8□□□□□ -0.04
ATF1P18846 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.8□□□□□ -0.04
ATF1P18846 AC144831.1-201ENST00000573312 2656 ntBASIC14.8□□□□□ -0.04
ATF1P18846 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ATF1P18846 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.8□□□□□ -0.04
ATF1P18846 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.8□□□□□ -0.04
ATF1P18846 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ATF1P18846 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ATF1P18846 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.8□□□□□ -0.04
ATF1P18846 AL356309.3-201ENST00000624132 1934 ntBASIC14.8□□□□□ -0.04
ATF1P18846 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ATF1P18846 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATF1P18846 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
ATF1P18846 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ATF1P18846 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms