Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 AL603756.1-201ENST00000606511 2163 ntBASIC16.44■□□□□ 0.22
PCNAP12004 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.44■□□□□ 0.22
PCNAP12004 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCNAP12004 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.44■□□□□ 0.22
PCNAP12004 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.44■□□□□ 0.22
PCNAP12004 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.44■□□□□ 0.22
PCNAP12004 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.44■□□□□ 0.22
PCNAP12004 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PCNAP12004 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
PCNAP12004 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.44■□□□□ 0.22
PCNAP12004 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.44■□□□□ 0.22
PCNAP12004 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCNAP12004 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.44■□□□□ 0.22
PCNAP12004 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.44■□□□□ 0.22
PCNAP12004 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.44■□□□□ 0.22
PCNAP12004 AL590787.1-201ENST00000568856 1315 ntBASIC16.44■□□□□ 0.22
PCNAP12004 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
PCNAP12004 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCNAP12004 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCNAP12004 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCNAP12004 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.43■□□□□ 0.22
PCNAP12004 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.43■□□□□ 0.22
PCNAP12004 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCNAP12004 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCNAP12004 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.43■□□□□ 0.22
PCNAP12004 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.43■□□□□ 0.22
PCNAP12004 RNF216P1-203ENST00000404404 2427 ntBASIC16.43■□□□□ 0.22
PCNAP12004 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.43■□□□□ 0.22
PCNAP12004 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 UNC93B7-201ENST00000509439 705 ntBASIC16.43■□□□□ 0.22
PCNAP12004 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.43■□□□□ 0.22
PCNAP12004 AC139887.3-201ENST00000568585 713 ntBASIC16.43■□□□□ 0.22
PCNAP12004 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.43■□□□□ 0.22
PCNAP12004 AL589182.2-201ENST00000619332 1049 ntBASIC16.43■□□□□ 0.22
PCNAP12004 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCNAP12004 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PCNAP12004 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCNAP12004 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PCNAP12004 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.43■□□□□ 0.22
PCNAP12004 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCNAP12004 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PCNAP12004 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCNAP12004 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.42■□□□□ 0.22
PCNAP12004 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCNAP12004 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.42■□□□□ 0.22
PCNAP12004 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.42■□□□□ 0.22
PCNAP12004 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCNAP12004 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.42■□□□□ 0.22
PCNAP12004 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.42■□□□□ 0.22
PCNAP12004 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.42■□□□□ 0.22
PCNAP12004 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.42■□□□□ 0.22
PCNAP12004 AL139424.1-201ENST00000607572 797 ntBASIC16.42■□□□□ 0.22
PCNAP12004 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.42■□□□□ 0.22
PCNAP12004 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms