Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.82■□□□□ 0.6
GGPS1O95749 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
GGPS1O95749 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.82■□□□□ 0.6
GGPS1O95749 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.82■□□□□ 0.6
GGPS1O95749 AC005498.2-205ENST00000593218 784 ntBASIC18.82■□□□□ 0.6
GGPS1O95749 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.82■□□□□ 0.6
GGPS1O95749 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GGPS1O95749 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.81■□□□□ 0.6
GGPS1O95749 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.81■□□□□ 0.6
GGPS1O95749 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.81■□□□□ 0.6
GGPS1O95749 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.81■□□□□ 0.6
GGPS1O95749 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.81■□□□□ 0.6
GGPS1O95749 CNN2P2-201ENST00000443536 909 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 CNN2P3-201ENST00000450201 906 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 AC067863.1-201ENST00000494933 530 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.81■□□□□ 0.6
GGPS1O95749 SLC25A39P2-201ENST00000537614 270 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 AL512356.2-201ENST00000546955 174 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.81■□□□□ 0.6
GGPS1O95749 SPCS2P1-201ENST00000561636 679 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 AC027307.2-201ENST00000591252 911 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.81■□□□□ 0.6
GGPS1O95749 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.81■□□□□ 0.6
GGPS1O95749 AL136317.3-201ENST00000618497 906 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 AC008267.7-201ENST00000624570 1194 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 AC084121.4-201ENST00000641598 221 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 AF228730.8-201ENST00000642140 221 ntBASIC18.81■□□□□ 0.6
GGPS1O95749 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.81■□□□□ 0.6
GGPS1O95749 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.81■□□□□ 0.6
GGPS1O95749 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GGPS1O95749 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GGPS1O95749 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 AC009053.2-201ENST00000563701 2365 ntBASIC18.8■□□□□ 0.6
GGPS1O95749 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 FAM8A3P-201ENST00000427218 844 ntBASIC18.8■□□□□ 0.6
GGPS1O95749 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.8■□□□□ 0.6
GGPS1O95749 AC069262.1-201ENST00000539058 672 ntBASIC18.8■□□□□ 0.6
GGPS1O95749 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 DUX4L27-201ENST00000554796 1261 ntBASIC18.8■□□□□ 0.6
GGPS1O95749 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.8■□□□□ 0.6
GGPS1O95749 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GGPS1O95749 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GGPS1O95749 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
GGPS1O95749 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
GGPS1O95749 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GGPS1O95749 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GGPS1O95749 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GGPS1O95749 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms