Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.32
USP1O94782 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.08■□□□□ 0.32
USP1O94782 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.08■□□□□ 0.32
USP1O94782 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.08■□□□□ 0.32
USP1O94782 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 AL356309.3-201ENST00000624132 1934 ntBASIC17.08■□□□□ 0.32
USP1O94782 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
USP1O94782 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
USP1O94782 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
USP1O94782 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.07■□□□□ 0.32
USP1O94782 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.07■□□□□ 0.32
USP1O94782 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.07■□□□□ 0.32
USP1O94782 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.07■□□□□ 0.32
USP1O94782 HLA-J-202ENST00000469281 1241 ntBASIC17.07■□□□□ 0.32
USP1O94782 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
USP1O94782 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
USP1O94782 AL732292.2-201ENST00000609649 430 ntBASIC17.07■□□□□ 0.32
USP1O94782 AL121772.3-201ENST00000610840 674 ntBASIC17.07■□□□□ 0.32
USP1O94782 AL589182.2-201ENST00000619332 1049 ntBASIC17.07■□□□□ 0.32
USP1O94782 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
USP1O94782 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
USP1O94782 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
USP1O94782 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
USP1O94782 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP1O94782 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
USP1O94782 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP1O94782 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.06■□□□□ 0.32
USP1O94782 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP1O94782 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
USP1O94782 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.06■□□□□ 0.32
USP1O94782 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
USP1O94782 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.06■□□□□ 0.32
USP1O94782 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
USP1O94782 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
USP1O94782 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.06■□□□□ 0.32
USP1O94782 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.06■□□□□ 0.32
USP1O94782 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.06■□□□□ 0.32
USP1O94782 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.06■□□□□ 0.32
USP1O94782 AL139424.1-201ENST00000607572 797 ntBASIC17.06■□□□□ 0.32
USP1O94782 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.06■□□□□ 0.32
USP1O94782 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.06■□□□□ 0.32
USP1O94782 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.06■□□□□ 0.32
USP1O94782 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USP1O94782 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP1O94782 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.06■□□□□ 0.32
USP1O94782 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP1O94782 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.05■□□□□ 0.32
USP1O94782 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
USP1O94782 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.05■□□□□ 0.32
USP1O94782 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms