Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LDB3O75112 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LDB3O75112 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.83■□□□□ 0.12
LDB3O75112 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.83■□□□□ 0.12
LDB3O75112 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.83■□□□□ 0.12
LDB3O75112 LINC00895-201ENST00000629028 1637 ntBASIC15.83■□□□□ 0.12
LDB3O75112 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.83■□□□□ 0.12
LDB3O75112 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.82■□□□□ 0.12
LDB3O75112 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LDB3O75112 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.82■□□□□ 0.12
LDB3O75112 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LDB3O75112 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LDB3O75112 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LDB3O75112 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LDB3O75112 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 RHOQP3-201ENST00000437982 621 ntBASIC15.82■□□□□ 0.12
LDB3O75112 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LDB3O75112 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.82■□□□□ 0.12
LDB3O75112 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.82■□□□□ 0.12
LDB3O75112 AC004877.2-201ENST00000623941 599 ntBASIC15.82■□□□□ 0.12
LDB3O75112 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LDB3O75112 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.82■□□□□ 0.12
LDB3O75112 BCAR1-209ENST00000546196 1340 ntBASIC15.82■□□□□ 0.12
LDB3O75112 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.82■□□□□ 0.12
LDB3O75112 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.82■□□□□ 0.12
LDB3O75112 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.82■□□□□ 0.12
LDB3O75112 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDB3O75112 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LDB3O75112 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.81■□□□□ 0.12
LDB3O75112 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LDB3O75112 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
LDB3O75112 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LDB3O75112 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.81■□□□□ 0.12
LDB3O75112 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.81■□□□□ 0.12
LDB3O75112 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LDB3O75112 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
LDB3O75112 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LDB3O75112 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.81■□□□□ 0.12
LDB3O75112 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.81■□□□□ 0.12
LDB3O75112 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.81■□□□□ 0.12
LDB3O75112 AC099398.1-201ENST00000567919 2776 ntBASIC15.81■□□□□ 0.12
LDB3O75112 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LDB3O75112 MIR4492-201ENST00000581627 80 ntBASIC15.81■□□□□ 0.12
LDB3O75112 AC012569.1-201ENST00000591191 1524 ntBASIC15.81■□□□□ 0.12
LDB3O75112 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.81■□□□□ 0.12
LDB3O75112 AL671710.1-201ENST00000610245 2349 ntBASIC15.81■□□□□ 0.12
LDB3O75112 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.81■□□□□ 0.12
LDB3O75112 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
LDB3O75112 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LDB3O75112 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDB3O75112 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.8■□□□□ 0.12
LDB3O75112 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB3O75112 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB3O75112 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LDB3O75112 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB3O75112 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LDB3O75112 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.8■□□□□ 0.12
LDB3O75112 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.8■□□□□ 0.12
LDB3O75112 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB3O75112 AC025580.3-201ENST00000617932 1424 ntBASIC15.8■□□□□ 0.12
LDB3O75112 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB3O75112 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB3O75112 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB3O75112 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.8■□□□□ 0.12
LDB3O75112 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.8■□□□□ 0.12
LDB3O75112 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.8■□□□□ 0.12
LDB3O75112 AC087641.1-201ENST00000557561 1021 ntBASIC15.8■□□□□ 0.12
LDB3O75112 CYP2A7P1-201ENST00000595391 815 ntBASIC15.8■□□□□ 0.12
LDB3O75112 AC023141.13-201ENST00000604991 943 ntBASIC15.8■□□□□ 0.12
LDB3O75112 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms