Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.43■□□□□ 0.38
MSI1O43347 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.43■□□□□ 0.38
MSI1O43347 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MSI1O43347 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.43■□□□□ 0.38
MSI1O43347 AC211486.1-202ENST00000416371 468 ntBASIC17.43■□□□□ 0.38
MSI1O43347 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.43■□□□□ 0.38
MSI1O43347 MKNK2P1-201ENST00000437526 628 ntBASIC17.43■□□□□ 0.38
MSI1O43347 AC004967.1-201ENST00000453589 447 ntBASIC17.43■□□□□ 0.38
MSI1O43347 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 AC211476.1-201ENST00000503899 468 ntBASIC17.43■□□□□ 0.38
MSI1O43347 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 AC112191.1-201ENST00000523689 701 ntBASIC17.43■□□□□ 0.38
MSI1O43347 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
MSI1O43347 AL009183.1-201ENST00000603760 355 ntBASIC17.43■□□□□ 0.38
MSI1O43347 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.43■□□□□ 0.38
MSI1O43347 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.43■□□□□ 0.38
MSI1O43347 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.43■□□□□ 0.38
MSI1O43347 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MSI1O43347 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
MSI1O43347 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.42■□□□□ 0.38
MSI1O43347 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.42■□□□□ 0.38
MSI1O43347 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
MSI1O43347 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.42■□□□□ 0.38
MSI1O43347 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.42■□□□□ 0.38
MSI1O43347 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.42■□□□□ 0.38
MSI1O43347 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.42■□□□□ 0.38
MSI1O43347 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.42■□□□□ 0.38
MSI1O43347 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.42■□□□□ 0.38
MSI1O43347 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.42■□□□□ 0.38
MSI1O43347 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
MSI1O43347 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 SNX33P1-201ENST00000592116 1762 ntBASIC17.42■□□□□ 0.38
MSI1O43347 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
MSI1O43347 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.42■□□□□ 0.38
MSI1O43347 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MSI1O43347 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
MSI1O43347 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MSI1O43347 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 AL603756.1-201ENST00000606511 2163 ntBASIC17.42■□□□□ 0.38
MSI1O43347 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MSI1O43347 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
MSI1O43347 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MSI1O43347 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MSI1O43347 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MSI1O43347 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MSI1O43347 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.41■□□□□ 0.38
MSI1O43347 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MSI1O43347 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 AC078925.2-201ENST00000624013 1973 ntBASIC17.41■□□□□ 0.38
MSI1O43347 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 AC106886.4-201ENST00000623557 2502 ntBASIC17.41■□□□□ 0.38
MSI1O43347 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 AC002056.1-201ENST00000395613 760 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms