Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00473A8K010 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00473A8K010 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00473A8K010 PAWRP1-201ENST00000451083 565 ntBASIC13.71□□□□□ -0.21
LINC00473A8K010 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00473A8K010 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LINC00473A8K010 SART3-203ENST00000546611 1184 ntBASIC13.71□□□□□ -0.21
LINC00473A8K010 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.71□□□□□ -0.21
LINC00473A8K010 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00473A8K010 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 AL355877.3-201ENST00000622820 899 ntBASIC13.71□□□□□ -0.21
LINC00473A8K010 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 AL671710.1-201ENST00000610245 2349 ntBASIC13.71□□□□□ -0.21
LINC00473A8K010 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00473A8K010 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00473A8K010 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.71□□□□□ -0.22
LINC00473A8K010 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.71□□□□□ -0.22
LINC00473A8K010 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00473A8K010 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00473A8K010 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00473A8K010 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00473A8K010 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00473A8K010 SNX33P1-201ENST00000592116 1762 ntBASIC13.71□□□□□ -0.22
LINC00473A8K010 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC00473A8K010 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00473A8K010 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00473A8K010 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC00473A8K010 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC00473A8K010 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 UPK3BP1-201ENST00000428678 509 ntBASIC13.7□□□□□ -0.22
LINC00473A8K010 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 KRT18P31-201ENST00000506277 1292 ntBASIC13.7□□□□□ -0.22
LINC00473A8K010 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00473A8K010 MIR3652-201ENST00000579335 131 ntBASIC13.7□□□□□ -0.22
LINC00473A8K010 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LINC00473A8K010 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
LINC00473A8K010 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00473A8K010 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.7□□□□□ -0.22
LINC00473A8K010 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00473A8K010 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00473A8K010 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
LINC00473A8K010 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00473A8K010 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00473A8K010 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00473A8K010 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms