Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 AC069120.2-201ENST00000524091 540 ntBASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 AJ011932.1-201ENST00000621707 465 ntBASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPO2Q9UMS6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 BASP1P1-201ENST00000430708 665 ntBASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 AC092364.2-202ENST00000597012 1073 ntBASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 AL031731.1-201ENST00000642131 2094 ntBASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNPO2Q9UMS6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.66
SYNPO2Q9UMS6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 MIR4453-201ENST00000584019 89 ntBASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 AP001094.4-201ENST00000579008 2176 ntBASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 GGT4P-201ENST00000623672 1708 ntBASIC19.2■□□□□ 0.66
SYNPO2Q9UMS6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.19■□□□□ 0.66
SYNPO2Q9UMS6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms