Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EBF1Q9UH73 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.17■□□□□ 0.34
EBF1Q9UH73 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
EBF1Q9UH73 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EBF1Q9UH73 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 BASP1P1-201ENST00000430708 665 ntBASIC17.16■□□□□ 0.34
EBF1Q9UH73 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 AC107918.2-201ENST00000530817 355 ntBASIC17.16■□□□□ 0.34
EBF1Q9UH73 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 LINC01451-201ENST00000623792 534 ntBASIC17.16■□□□□ 0.34
EBF1Q9UH73 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EBF1Q9UH73 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EBF1Q9UH73 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 PP12613-201ENST00000424958 2230 ntBASIC17.15■□□□□ 0.34
EBF1Q9UH73 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 KRT18P32-201ENST00000424695 1287 ntBASIC17.15■□□□□ 0.34
EBF1Q9UH73 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 RARRES2P8-201ENST00000566335 367 ntBASIC17.15■□□□□ 0.34
EBF1Q9UH73 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 MIR4515-201ENST00000584082 81 ntBASIC17.15■□□□□ 0.34
EBF1Q9UH73 AL161645.1-201ENST00000622716 1255 ntBASIC17.15■□□□□ 0.34
EBF1Q9UH73 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 TUBB3P1-201ENST00000405796 1332 ntBASIC17.15■□□□□ 0.34
EBF1Q9UH73 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.15■□□□□ 0.34
EBF1Q9UH73 AL391005.1-201ENST00000623953 2435 ntBASIC17.15■□□□□ 0.34
EBF1Q9UH73 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EBF1Q9UH73 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
EBF1Q9UH73 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
EBF1Q9UH73 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
EBF1Q9UH73 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms