Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CLN8Q9UBY8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN8Q9UBY8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.29□□□□□ -0.12
CLN8Q9UBY8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.29□□□□□ -0.12
CLN8Q9UBY8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLN8Q9UBY8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.29□□□□□ -0.12
CLN8Q9UBY8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.28□□□□□ -0.12
CLN8Q9UBY8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 AC108073.2-201ENST00000464002 357 ntBASIC14.28□□□□□ -0.12
CLN8Q9UBY8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.28□□□□□ -0.12
CLN8Q9UBY8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN8Q9UBY8 AC046158.3-201ENST00000624947 2558 ntBASIC14.28□□□□□ -0.12
CLN8Q9UBY8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 AC018695.7-201ENST00000624587 2492 ntBASIC14.27□□□□□ -0.12
CLN8Q9UBY8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLN8Q9UBY8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 MRPL20P1-201ENST00000400819 433 ntBASIC14.27□□□□□ -0.13
CLN8Q9UBY8 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 CRYGEP-201ENST00000412192 528 ntBASIC14.27□□□□□ -0.13
CLN8Q9UBY8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 RNA5SP416-201ENST00000516838 111 ntBASIC14.27□□□□□ -0.13
CLN8Q9UBY8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 FAM197Y3-203ENST00000618346 717 ntBASIC14.27□□□□□ -0.13
CLN8Q9UBY8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN8Q9UBY8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 EGFEM1P-202ENST00000431685 1563 ntBASIC14.26□□□□□ -0.13
CLN8Q9UBY8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLN8Q9UBY8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms