Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP4Q9BWG4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP4Q9BWG4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP4Q9BWG4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 HMGA1P5-201ENST00000412453 271 ntBASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 TSPY12P-201ENST00000421279 868 ntBASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 AL158047.1-201ENST00000445918 881 ntBASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 AC034232.1-201ENST00000506026 1064 ntBASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP4Q9BWG4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms