Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF34Q969K3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF34Q969K3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF34Q969K3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RNF34Q969K3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF34Q969K3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 KRT8P49-201ENST00000604166 1432 ntBASIC17.63■□□□□ 0.41
RNF34Q969K3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF34Q969K3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF34Q969K3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF34Q969K3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF34Q969K3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF34Q969K3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF34Q969K3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF34Q969K3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF34Q969K3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RNF34Q969K3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF34Q969K3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF34Q969K3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.62■□□□□ 0.41
RNF34Q969K3 HCG4B-203ENST00000450128 991 ntBASIC17.62■□□□□ 0.41
RNF34Q969K3 POLD2P1-201ENST00000511220 997 ntBASIC17.62■□□□□ 0.41
RNF34Q969K3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF34Q969K3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF34Q969K3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 FAM197Y3-203ENST00000618346 717 ntBASIC17.62■□□□□ 0.41
RNF34Q969K3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 TOP3BP1-201ENST00000420768 1380 ntBASIC17.62■□□□□ 0.41
RNF34Q969K3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF34Q969K3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF34Q969K3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF34Q969K3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RNF34Q969K3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF34Q969K3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF34Q969K3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF34Q969K3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 AL513480.1-201ENST00000451731 511 ntBASIC17.61■□□□□ 0.41
RNF34Q969K3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF34Q969K3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF34Q969K3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF34Q969K3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF34Q969K3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF34Q969K3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF34Q969K3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
RNF34Q969K3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF34Q969K3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF34Q969K3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF34Q969K3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF34Q969K3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF34Q969K3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms