Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 AL645728.1-201ENST00000366221 2101 ntBASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 MST1L-201ENST00000442552 2185 ntBASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 PCDHA14-201ENST00000506751 2298 ntBASIC17.1■□□□□ 0.33
PTCD2Q8WV60 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 AL513477.1-201ENST00000602865 2407 ntBASIC17.1■□□□□ 0.33
PTCD2Q8WV60 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 OR6D1P-203ENST00000641209 4860 ntBASIC17.1■□□□□ 0.33
PTCD2Q8WV60 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 PMS2P1-201ENST00000431037 1228 ntBASIC17.09■□□□□ 0.33
PTCD2Q8WV60 AC007967.2-201ENST00000432613 625 ntBASIC17.09■□□□□ 0.33
PTCD2Q8WV60 HLA-J-202ENST00000469281 1241 ntBASIC17.09■□□□□ 0.33
PTCD2Q8WV60 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 AC140113.2-201ENST00000604370 208 ntBASIC17.09■□□□□ 0.33
PTCD2Q8WV60 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCD2Q8WV60 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 AL391256.1-201ENST00000443260 1855 ntBASIC17.08■□□□□ 0.33
PTCD2Q8WV60 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PTCD2Q8WV60 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms