Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 PMS2P1-201ENST00000431037 1228 ntBASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 PRSS29P-201ENST00000440800 595 ntBASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 AC010654.1-201ENST00000615722 808 ntBASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TMEM35BQ8NCS4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TMEM35BQ8NCS4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 OR7E47P-204ENST00000575924 449 ntBASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 AL118508.1-201ENST00000613502 2345 ntBASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 SLC22A20-204ENST00000530038 1673 ntBASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 UBALD1-205ENST00000590891 2641 ntBASIC17.83■□□□□ 0.44
TMEM35BQ8NCS4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 RNA5SP415-201ENST00000517246 115 ntBASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 IGHV3-22-201ENST00000520721 359 ntBASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 UNC93B6-202ENST00000528242 690 ntBASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 MIR4751-201ENST00000578027 74 ntBASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 AP001350.2-201ENST00000625104 1094 ntBASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM35BQ8NCS4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms