Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01561Q8N1V8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 AC092171.3-201ENST00000610122 2651 ntBASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 SPDYE21P-201ENST00000413323 827 ntBASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 POM121L3P-201ENST00000419331 1163 ntBASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 Z69720.1-201ENST00000601483 472 ntBASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 TERC-201ENST00000602385 541 ntBASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01561Q8N1V8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
LINC01561Q8N1V8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.59
LINC01561Q8N1V8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
LINC01561Q8N1V8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LINC01561Q8N1V8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LINC01561Q8N1V8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LINC01561Q8N1V8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
LINC01561Q8N1V8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.59
LINC01561Q8N1V8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 GGT3P-204ENST00000453783 1664 ntBASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms