Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 BASP1P1-201ENST00000430708 665 ntBASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 MIR346-201ENST00000362234 95 ntBASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 MEIS3P1-201ENST00000495167 958 ntBASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 AC073592.8-201ENST00000624126 511 ntBASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 AP3S2-216ENST00000617003 1561 ntBASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAI1Q7Z5J4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 AC007967.4-201ENST00000614700 386 ntBASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 AL138828.2-201ENST00000615812 383 ntBASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 AC022144.1-201ENST00000602255 1580 ntBASIC14.24□□□□□ -0.13
RAI1Q7Z5J4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 IGHV3-62-201ENST00000520057 340 ntBASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 IGHV3-42-201ENST00000520410 361 ntBASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 AC025048.6-201ENST00000634326 1161 ntBASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 AC004840.1-201ENST00000636359 365 ntBASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAI1Q7Z5J4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms