Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 TCAF2P1-201ENST00000291129 2421 ntBASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDZRN4Q6ZMN7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 FDX1P1-201ENST00000449115 551 ntBASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 AC091607.1-201ENST00000490318 1060 ntBASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.44■□□□□ 0.7
PDZRN4Q6ZMN7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 AL024508.2-201ENST00000607749 1894 ntBASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 KRT8P10-201ENST00000450021 1447 ntBASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 AC078925.2-201ENST00000624013 1973 ntBASIC19.43■□□□□ 0.7
PDZRN4Q6ZMN7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms