Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 AC087163.2-201ENST00000457299 853 ntBASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 AC078925.2-201ENST00000624013 1973 ntBASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 AC073621.1-201ENST00000392730 636 ntBASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 TPM4P1-201ENST00000436100 807 ntBASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 AC018712.1-201ENST00000455767 687 ntBASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 AL356488.2-201ENST00000602755 427 ntBASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 LINC00895-201ENST00000629028 1637 ntBASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST2H2AA3Q6FI13 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 RNF216P1-203ENST00000404404 2427 ntBASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms