Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TTC39BQ5VTQ0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 SLC25A6P2-201ENST00000497974 877 ntBASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 AC018695.7-201ENST00000624587 2492 ntBASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TTC39BQ5VTQ0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 IGLL3P-201ENST00000412472 434 ntBASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 PGAM5P1-201ENST00000518923 814 ntBASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 AC124947.2-201ENST00000547118 1133 ntBASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 AC096734.2-201ENST00000562054 433 ntBASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC39BQ5VTQ0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 AC002310.6-201ENST00000624451 1377 ntBASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC39BQ5VTQ0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms