Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USH1GQ495M9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.28■□□□□ 0.68
USH1GQ495M9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
USH1GQ495M9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USH1GQ495M9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
USH1GQ495M9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
USH1GQ495M9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 AC005237.2-201ENST00000434368 219 ntBASIC19.28■□□□□ 0.68
USH1GQ495M9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 AC023141.5-201ENST00000458585 616 ntBASIC19.28■□□□□ 0.68
USH1GQ495M9 RN7SL589P-201ENST00000481268 310 ntBASIC19.28■□□□□ 0.68
USH1GQ495M9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.28■□□□□ 0.68
USH1GQ495M9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.28■□□□□ 0.68
USH1GQ495M9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
USH1GQ495M9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.28■□□□□ 0.68
USH1GQ495M9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
USH1GQ495M9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
USH1GQ495M9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.28■□□□□ 0.68
USH1GQ495M9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.28■□□□□ 0.68
USH1GQ495M9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
USH1GQ495M9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USH1GQ495M9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
USH1GQ495M9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
USH1GQ495M9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.28■□□□□ 0.68
USH1GQ495M9 AL671710.1-201ENST00000610245 2349 ntBASIC19.28■□□□□ 0.68
USH1GQ495M9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.27■□□□□ 0.68
USH1GQ495M9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
USH1GQ495M9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 AL627223.1-201ENST00000416693 442 ntBASIC19.27■□□□□ 0.68
USH1GQ495M9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
USH1GQ495M9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
USH1GQ495M9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
USH1GQ495M9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
USH1GQ495M9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USH1GQ495M9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.27■□□□□ 0.67
USH1GQ495M9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USH1GQ495M9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USH1GQ495M9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USH1GQ495M9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USH1GQ495M9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.26■□□□□ 0.67
USH1GQ495M9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
USH1GQ495M9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.26■□□□□ 0.67
USH1GQ495M9 PMS2P4-201ENST00000412466 1052 ntBASIC19.26■□□□□ 0.67
USH1GQ495M9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.26■□□□□ 0.67
USH1GQ495M9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.26■□□□□ 0.67
USH1GQ495M9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.26■□□□□ 0.67
USH1GQ495M9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.26■□□□□ 0.67
USH1GQ495M9 AC106028.4-201ENST00000614509 607 ntBASIC19.26■□□□□ 0.67
USH1GQ495M9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.26■□□□□ 0.67
USH1GQ495M9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.26■□□□□ 0.67
USH1GQ495M9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 AC016027.1-202ENST00000607927 1699 ntBASIC19.26■□□□□ 0.67
USH1GQ495M9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.26■□□□□ 0.67
USH1GQ495M9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.26■□□□□ 0.67
USH1GQ495M9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USH1GQ495M9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USH1GQ495M9 AKAP8P1-201ENST00000434743 1349 ntBASIC19.25■□□□□ 0.67
USH1GQ495M9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
USH1GQ495M9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.25■□□□□ 0.67
USH1GQ495M9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms