Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDC42P60953 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDC42P60953 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDC42P60953 TSPY15P-201ENST00000457163 923 ntBASIC15.46■□□□□ 0.07
CDC42P60953 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDC42P60953 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CDC42P60953 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
CDC42P60953 AC073912.3-201ENST00000624414 853 ntBASIC15.46■□□□□ 0.07
CDC42P60953 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDC42P60953 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.46■□□□□ 0.07
CDC42P60953 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDC42P60953 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.46■□□□□ 0.07
CDC42P60953 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDC42P60953 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDC42P60953 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.46■□□□□ 0.07
CDC42P60953 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.46■□□□□ 0.06
CDC42P60953 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.46■□□□□ 0.06
CDC42P60953 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.46■□□□□ 0.06
CDC42P60953 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.46■□□□□ 0.06
CDC42P60953 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDC42P60953 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.45■□□□□ 0.06
CDC42P60953 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.45■□□□□ 0.06
CDC42P60953 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CDC42P60953 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 LIN28AP1-201ENST00000429574 405 ntBASIC15.45■□□□□ 0.06
CDC42P60953 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.45■□□□□ 0.06
CDC42P60953 GUSBP12-201ENST00000513727 720 ntBASIC15.45■□□□□ 0.06
CDC42P60953 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.45■□□□□ 0.06
CDC42P60953 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CDC42P60953 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 Z83836.1-201ENST00000624605 1642 ntBASIC15.45■□□□□ 0.06
CDC42P60953 LINC00895-201ENST00000629028 1637 ntBASIC15.45■□□□□ 0.06
CDC42P60953 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 AL021920.2-201ENST00000624828 1351 ntBASIC15.45■□□□□ 0.06
CDC42P60953 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDC42P60953 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.45■□□□□ 0.06
CDC42P60953 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 AL513477.1-201ENST00000602865 2407 ntBASIC15.45■□□□□ 0.06
CDC42P60953 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDC42P60953 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CDC42P60953 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDC42P60953 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.44■□□□□ 0.06
CDC42P60953 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.44■□□□□ 0.06
CDC42P60953 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 ATP5G1P1-201ENST00000448724 379 ntBASIC15.44■□□□□ 0.06
CDC42P60953 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 AC093827.2-201ENST00000512654 315 ntBASIC15.44■□□□□ 0.06
CDC42P60953 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDC42P60953 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDC42P60953 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms